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Original Article

Selection of suitable reference gene for gene expression studies of porcine ovaries under different conditions in quantitative reverse transcription polymerase chain reaction assay

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  • 발행기관
    한국동물생명공학회(구 한국동물번식학회) 바로가기
  • 간행물
    Journal of Animal Reproduction and Biotechnology 바로가기
  • 통권
    Volume. 37 No. 2 (2022.06)바로가기
  • 페이지
    pp.96-105
  • 저자
    Hwan-Deuk Kim, Hye-Jin Jeon, Min Jang, Seul-Gi Bae, Sung-Ho Yun, Jee-Eun Han, Seung-Joon Kim, Won-Jae Lee
  • 언어
    영어(ENG)
  • URL
    https://www.earticle.net/Article/A414530

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초록

영어
The ovary undergoes substantial physiological changes along with estrus phase to mediate negative/positive feedback to the upstream reproductive tissues and to play a role in producing a fertilizable oocyte in the developing follicles. However, the disorder of estrus cycle in female can lead to diseases, such as cystic ovary which is directly associated with decline of overall reproductive performance. In gene expression studies of ovaries, quantitative reverse transcription polymerase chain reaction (qPCR) assay has been widely applied. During this assay, although normalization of target genes against reference genes (RGs) has been indispensably conducted, the expression of RGs is also variable in each experimental condition which can result in false conclusion. Because the understanding for stable RG in porcine ovaries was still limited, we attempted to assess the stability of RGs from the pool of ten commonly used RGs (18S, B2M, PPIA, RPL4, SDHA, ACTB, GAPDH, HPRT1, YWHAZ, and TBP) in the porcine ovaries under different estrus phase (follicular and luteal phase) and cystic condition, using stable RG-finding programs (geNorm, Normfinder, and BestKeeper). The significant (p < 0.01) differences in Ct values of RGs in the porcine ovaries under different conditions were identified. In assessing the stability of RGs, three programs comprehensively agreed that TBP and YWHAZ were suitable RGs to study porcine ovaries under different conditions but ACTB and GAPDH were inappropriate RGs in this experimental condition. We hope that these results contribute to plan the experiment design in the field of reproductive physiology in pigs as reference data.

목차

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
Ethics statement
Chemicals and media
Sampling from pigs
Enzyme-linked immunoabsorbent assay (ELISA) to confirm estrus phase
Candidate of reference genes (RGs)
RNA extraction, cDNA preparation, and qPCR running
Assessment of stability of RGs in the porcine ovaries under different conditions
Statistical analysis
RESULTS
Confirmation of estrus phases in the normal ovaries and morphology of cystic ovaries
Specificity of RGs in qPCR
Assessment of stability of each RG in porcine ovaries
DISCUSSION
CONCLUSION
REFERENCES

키워드

cystic ovary estrus phase porcine ovary qPCR reference gene

저자

  • Hwan-Deuk Kim [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea, Department of Veterinary Research, Daegu Metropolitan City Institute of Health & Environment, Daegu 42183, Korea ]
  • Hye-Jin Jeon [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Min Jang [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Seul-Gi Bae [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Sung-Ho Yun [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Jee-Eun Han [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Seung-Joon Kim [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea, Institute of Equine Medicine, Kyungpook National University, Daegu 41566, Korea ]
  • Won-Jae Lee [ College of Veterinary Medicine, Kyungpook National University, Daegu 41566, Korea, Institute of Equine Medicine, Kyungpook National University, Daegu 41566, Korea ] Corresponding Author

참고문헌

자료제공 : 네이버학술정보

간행물 정보

발행기관

  • 발행기관명
    한국동물생명공학회(구 한국동물번식학회) [The Korean Society of Animal Reproduction and Biotechnology]
  • 설립연도
    1976
  • 분야
    농수해양>축산학
  • 소개
    동물번식생리학, 동물생명공학, 수의학, 인공수정 및 수정란이식을 이용한 동물개량에 관한 이론과 기술의 발전을 통해 학계, 연구계, 산업계 및 양축가 상호간의 협력을 도모함으로써 동물과학발전 및 사회일반의 이익에 기여 한다는 목적을 위해 노력해 나가겠습니다.

간행물

  • 간행물명
    Journal of Animal Reproduction and Biotechnology
  • 간기
    계간
  • pISSN
    2671-4639
  • eISSN
    2671-4663
  • 수록기간
    2019~2025
  • 십진분류
    KDC 527 DDC 636

이 권호 내 다른 논문 / Journal of Animal Reproduction and Biotechnology Volume. 37 No. 2

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