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Original Article

Computational Identification and Comparative Genomic Analysis of Soybean Oxidative Stress-Related Genes

첫 페이지 보기
  • 발행기관
    경북대학교 농업생명과학대학 바로가기
  • 간행물
    경북대농학지 바로가기
  • 통권
    Vol. 32 No. 1 (2014.03)바로가기
  • 페이지
    pp.43-52
  • 저자
    Sharma Arti, Bong-Gyu Mun, Byung-Wook Yun
  • 언어
    영어(ENG)
  • URL
    https://www.earticle.net/Article/A221298

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원문정보

초록

영어
Reactive oxygen and nitrogen species (ROS and RNS, respectively) are messengers that carry signals to alter the redox state in order to activate plant responses and other physiological processes, such as differentiation, aging, senescence, and pathogen defense. Quite a large number of genes are involved in this signaling and lead to oxidative stress in plants. Although the role of ROS/RNS during stress conditions is well documented, a comprehensive list of genes and comparative study of these genes has not yet been completed. Accordingly, the in silico identification of oxidative stress-related genes was performed for soybeans and Arabidopsis. These genes were also studied in relation to multiple domain prediction. The presence of domains like dehydogenase and ATPase suggests that these genes are involved in various metabolic processes, as well as the transportation of ions under optimal environmental conditions. In addition to a sequence analysis, a phylogenetic analysis was also performed to identify orthologous pairs among the soybean and Arabidopsis oxidative stress-related genes based on neighbor joining. This study was also conducted with the objective of further understanding the complex molecular signaling mechanism in plants under various stress conditions.

키워드

Arabidopsis Comparative genomics Oxidative stress Phylogenetic analysis Soybean

저자

  • Sharma Arti [ School of Applied Biosciences, Kyungpook National University ]
  • Bong-Gyu Mun [ School of Applied Biosciences, Kyungpook National University ]
  • Byung-Wook Yun [ School of Applied Biosciences, Kyungpook National University ] Corresponding Author

참고문헌

자료제공 : 네이버학술정보

간행물 정보

발행기관

  • 발행기관명
    경북대학교 농업생명과학대학
  • 분야
    농수해양>농학

간행물

  • 간행물명
    경북대농학지
  • 간기
    계간
  • pISSN
    2287-271X
  • eISSN
    2288-0356
  • 수록기간
    ~2014
  • 십진분류
    KDC 525 DDC 635

이 권호 내 다른 논문 / 경북대농학지 Vol. 32 No. 1

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